Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga11Q91XY8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga11Q91XY8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhga11Q91XY8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga11Q91XY8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga11Q91XY8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhga11Q91XY8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga11Q91XY8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga11Q91XY8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga11Q91XY8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga11Q91XY8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga11Q91XY8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhga11Q91XY8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga11Q91XY8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Golgb1-201ENSMUST00000023534 498 ntBASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga11Q91XY8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhga11Q91XY8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhga11Q91XY8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga11Q91XY8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga11Q91XY8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga11Q91XY8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms