Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb1Q91XX8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcdhgb1Q91XX8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgb1Q91XX8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb1Q91XX8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb1Q91XX8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb1Q91XX8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Gm42569-201ENSMUST00000200539 472 ntBASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb1Q91XX8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb1Q91XX8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb1Q91XX8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb1Q91XX8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb1Q91XX8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb1Q91XX8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb1Q91XX8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb1Q91XX8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Gm7291-201ENSMUST00000199147 382 ntBASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb1Q91XX8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Gm9988-201ENSMUST00000069786 435 ntBASIC20.24■□□□□ 0.83
Pcdhgb1Q91XX8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms