Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usb1Q91W78 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.27■□□□□ 0.68
Usb1Q91W78 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Usb1Q91W78 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usb1Q91W78 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usb1Q91W78 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Usb1Q91W78 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usb1Q91W78 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.26■□□□□ 0.67
Usb1Q91W78 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Usb1Q91W78 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.26■□□□□ 0.67
Usb1Q91W78 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.26■□□□□ 0.67
Usb1Q91W78 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Usb1Q91W78 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Usb1Q91W78 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usb1Q91W78 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
Usb1Q91W78 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.25■□□□□ 0.67
Usb1Q91W78 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Usb1Q91W78 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.25■□□□□ 0.67
Usb1Q91W78 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.25■□□□□ 0.67
Usb1Q91W78 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usb1Q91W78 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usb1Q91W78 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usb1Q91W78 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usb1Q91W78 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Usb1Q91W78 Gm8493-201ENSMUST00000196881 489 ntBASIC19.24■□□□□ 0.67
Usb1Q91W78 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usb1Q91W78 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usb1Q91W78 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.24■□□□□ 0.67
Usb1Q91W78 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usb1Q91W78 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usb1Q91W78 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.23■□□□□ 0.67
Usb1Q91W78 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.23■□□□□ 0.67
Usb1Q91W78 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.23■□□□□ 0.67
Usb1Q91W78 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usb1Q91W78 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.23■□□□□ 0.67
Usb1Q91W78 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usb1Q91W78 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usb1Q91W78 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usb1Q91W78 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usb1Q91W78 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Usb1Q91W78 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usb1Q91W78 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.22■□□□□ 0.67
Usb1Q91W78 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usb1Q91W78 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
Usb1Q91W78 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.22■□□□□ 0.67
Usb1Q91W78 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usb1Q91W78 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usb1Q91W78 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usb1Q91W78 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usb1Q91W78 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usb1Q91W78 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usb1Q91W78 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.2■□□□□ 0.66
Usb1Q91W78 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usb1Q91W78 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usb1Q91W78 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usb1Q91W78 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.19■□□□□ 0.66
Usb1Q91W78 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usb1Q91W78 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usb1Q91W78 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usb1Q91W78 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usb1Q91W78 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usb1Q91W78 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usb1Q91W78 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Usb1Q91W78 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Usb1Q91W78 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms