Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps4aQ8VEJ9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps4aQ8VEJ9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps4aQ8VEJ9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps4aQ8VEJ9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4aQ8VEJ9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps4aQ8VEJ9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Vps4aQ8VEJ9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps4aQ8VEJ9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps4aQ8VEJ9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Vps4aQ8VEJ9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms