Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg1dQ8VE91 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retreg1dQ8VE91 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Retreg1dQ8VE91 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retreg1dQ8VE91 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.27■□□□□ 0.67
Retreg1dQ8VE91 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Gm5874-201ENSMUST00000096101 508 ntBASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retreg1dQ8VE91 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retreg1dQ8VE91 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg1dQ8VE91 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retreg1dQ8VE91 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg1dQ8VE91 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg1dQ8VE91 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Retreg1dQ8VE91 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg1dQ8VE91 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg1dQ8VE91 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg1dQ8VE91 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms