Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkd2Q8VE28 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkd2Q8VE28 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkd2Q8VE28 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.77■□□□□ 0.43
Nkd2Q8VE28 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkd2Q8VE28 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkd2Q8VE28 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Gm43173-201ENSMUST00000202246 593 ntBASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Gm5874-201ENSMUST00000096101 508 ntBASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkd2Q8VE28 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkd2Q8VE28 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkd2Q8VE28 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkd2Q8VE28 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Nkd2Q8VE28 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nkd2Q8VE28 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nkd2Q8VE28 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkd2Q8VE28 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.72■□□□□ 0.43
Nkd2Q8VE28 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.71■□□□□ 0.43
Nkd2Q8VE28 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkd2Q8VE28 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkd2Q8VE28 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkd2Q8VE28 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nkd2Q8VE28 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Gm43530-201ENSMUST00000195920 274 ntBASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Nkd2Q8VE28 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkd2Q8VE28 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms