Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna3Q8R4G9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna3Q8R4G9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna3Q8R4G9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chrna3Q8R4G9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Chrna3Q8R4G9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna3Q8R4G9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chrna3Q8R4G9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna3Q8R4G9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna3Q8R4G9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna3Q8R4G9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms