Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zcchc9Q8R1J3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zcchc9Q8R1J3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zcchc9Q8R1J3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zcchc9Q8R1J3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zcchc9Q8R1J3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zcchc9Q8R1J3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zcchc9Q8R1J3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Zcchc9Q8R1J3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zcchc9Q8R1J3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zcchc9Q8R1J3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Zcchc9Q8R1J3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms