Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Gm7514-201ENSMUST00000209475 934 ntBASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alms1Q8K4E0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.25■□□□□ 0.67
Alms1Q8K4E0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Gm12441-201ENSMUST00000121806 588 ntBASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Alms1Q8K4E0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Alms1Q8K4E0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.22■□□□□ 0.67
Alms1Q8K4E0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Alms1Q8K4E0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Alms1Q8K4E0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alms1Q8K4E0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Gm20760-201ENSMUST00000179197 648 ntBASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alms1Q8K4E0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alms1Q8K4E0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alms1Q8K4E0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms