Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clrn1Q8K445 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Mir7075-201ENSMUST00000184187 82 ntBASIC18.41■□□□□ 0.54
Clrn1Q8K445 Spcs1-204ENSMUST00000226782 949 ntBASIC18.41■□□□□ 0.54
Clrn1Q8K445 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.41■□□□□ 0.54
Clrn1Q8K445 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.41■□□□□ 0.54
Clrn1Q8K445 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.4■□□□□ 0.54
Clrn1Q8K445 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.4■□□□□ 0.54
Clrn1Q8K445 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clrn1Q8K445 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Gm45417-201ENSMUST00000209533 758 ntBASIC18.39■□□□□ 0.53
Clrn1Q8K445 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.39■□□□□ 0.53
Clrn1Q8K445 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.39■□□□□ 0.53
Clrn1Q8K445 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Gm12251-201ENSMUST00000117893 792 ntBASIC18.38■□□□□ 0.53
Clrn1Q8K445 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn1Q8K445 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn1Q8K445 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn1Q8K445 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms