Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn1Q8K0T0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn1Q8K0T0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn1Q8K0T0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Rtn1Q8K0T0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Serp2-204ENSMUST00000228055 705 ntBASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn1Q8K0T0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Smad6-203ENSMUST00000179458 273 ntBASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Gm43017-201ENSMUST00000198296 752 ntBASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn1Q8K0T0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rtn1Q8K0T0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rtn1Q8K0T0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rtn1Q8K0T0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Rtn1Q8K0T0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn1Q8K0T0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Rtn1Q8K0T0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.56■■□□□ 1.2
Rtn1Q8K0T0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn1Q8K0T0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn1Q8K0T0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.55■■□□□ 1.2
Rtn1Q8K0T0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.54■■□□□ 1.2
Rtn1Q8K0T0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn1Q8K0T0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn1Q8K0T0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn1Q8K0T0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn1Q8K0T0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Rtn1Q8K0T0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Rtn1Q8K0T0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn1Q8K0T0 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms