Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Gm9988-201ENSMUST00000069786 435 ntBASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgcll1Q8JZS7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgcll1Q8JZS7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Gm42778-201ENSMUST00000199644 553 ntBASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Hmgcll1Q8JZS7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgcll1Q8JZS7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Gm42569-201ENSMUST00000200539 472 ntBASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Hmgcll1Q8JZS7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Gm18671-201ENSMUST00000214826 683 ntBASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Hmgcll1Q8JZS7 Reep4-203ENSMUST00000226563 1444 ntBASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Hmgcll1Q8JZS7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 Gm7291-201ENSMUST00000199147 382 ntBASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgcll1Q8JZS7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Gm27405-201ENSMUST00000184201 112 ntBASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 AV356131-201ENSMUST00000206201 750 ntBASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmgcll1Q8JZS7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Gm13234-201ENSMUST00000120010 747 ntBASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgcll1Q8JZS7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcll1Q8JZS7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcll1Q8JZS7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmgcll1Q8JZS7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcll1Q8JZS7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgcll1Q8JZS7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms