Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfwd3Q8CIK8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfwd3Q8CIK8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfwd3Q8CIK8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfwd3Q8CIK8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfwd3Q8CIK8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfwd3Q8CIK8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Rfwd3Q8CIK8 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.27■□□□□ 0.51
Rfwd3Q8CIK8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfwd3Q8CIK8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfwd3Q8CIK8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfwd3Q8CIK8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfwd3Q8CIK8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms