Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim5Q8CI51 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Pdlim5Q8CI51 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Gm12922-201ENSMUST00000120626 809 ntBASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim5Q8CI51 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim5Q8CI51 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim5Q8CI51 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim5Q8CI51 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim5Q8CI51 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim5Q8CI51 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Golgb1-201ENSMUST00000023534 498 ntBASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim5Q8CI51 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim5Q8CI51 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim5Q8CI51 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim5Q8CI51 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim5Q8CI51 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms