Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PdgfcQ8CI19 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PdgfcQ8CI19 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PdgfcQ8CI19 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfcQ8CI19 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Gm6420-201ENSMUST00000193885 723 ntBASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.67■■□□□ 1.06
PdgfcQ8CI19 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PdgfcQ8CI19 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Gm12527-201ENSMUST00000117967 564 ntBASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Gm6365-201ENSMUST00000054711 744 ntBASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfcQ8CI19 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PdgfcQ8CI19 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PdgfcQ8CI19 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.64■■□□□ 1.05
PdgfcQ8CI19 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PdgfcQ8CI19 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfcQ8CI19 AA386476-201ENSMUST00000098781 1665 ntBASIC21.63■■□□□ 1.05
PdgfcQ8CI19 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PdgfcQ8CI19 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
PdgfcQ8CI19 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PdgfcQ8CI19 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PdgfcQ8CI19 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms