Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smc4Q8CG47 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.15■■□□□ 1.46
Smc4Q8CG47 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.15■■□□□ 1.46
Smc4Q8CG47 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.15■■□□□ 1.46
Smc4Q8CG47 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Smc4Q8CG47 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Smc4Q8CG47 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smc4Q8CG47 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smc4Q8CG47 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smc4Q8CG47 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smc4Q8CG47 Gm10849-201ENSMUST00000100397 618 ntBASIC24.14■■□□□ 1.45
Smc4Q8CG47 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.14■■□□□ 1.45
Smc4Q8CG47 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.14■■□□□ 1.45
Smc4Q8CG47 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smc4Q8CG47 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Smc4Q8CG47 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Gm27405-201ENSMUST00000184201 112 ntBASIC24.13■■□□□ 1.45
Smc4Q8CG47 Gm7291-201ENSMUST00000199147 382 ntBASIC24.13■■□□□ 1.45
Smc4Q8CG47 Gm10033-202ENSMUST00000211874 928 ntBASIC24.13■■□□□ 1.45
Smc4Q8CG47 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smc4Q8CG47 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.13■■□□□ 1.45
Smc4Q8CG47 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.12■■□□□ 1.45
Smc4Q8CG47 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smc4Q8CG47 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.12■■□□□ 1.45
Smc4Q8CG47 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Smc4Q8CG47 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smc4Q8CG47 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.12■■□□□ 1.45
Smc4Q8CG47 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smc4Q8CG47 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Smc4Q8CG47 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Smc4Q8CG47 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 AV356131-201ENSMUST00000206201 750 ntBASIC24.1■■□□□ 1.45
Smc4Q8CG47 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC24.1■■□□□ 1.45
Smc4Q8CG47 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.09■■□□□ 1.45
Smc4Q8CG47 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc4Q8CG47 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc4Q8CG47 Gm13234-201ENSMUST00000120010 747 ntBASIC24.08■■□□□ 1.45
Smc4Q8CG47 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC24.08■■□□□ 1.45
Smc4Q8CG47 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc4Q8CG47 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Smc4Q8CG47 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smc4Q8CG47 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Smc4Q8CG47 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
Smc4Q8CG47 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Smc4Q8CG47 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc4Q8CG47 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smc4Q8CG47 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.07■■□□□ 1.44
Smc4Q8CG47 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc4Q8CG47 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Smc4Q8CG47 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.06■■□□□ 1.44
Smc4Q8CG47 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc4Q8CG47 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smc4Q8CG47 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Reep4-203ENSMUST00000226563 1444 ntBASIC24.05■■□□□ 1.44
Smc4Q8CG47 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc4Q8CG47 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Smc4Q8CG47 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc4Q8CG47 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC24.04■■□□□ 1.44
Smc4Q8CG47 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms