Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc5Q8CG46 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.28■■□□□ 1.48
Smc5Q8CG46 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc5Q8CG46 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc5Q8CG46 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc5Q8CG46 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc5Q8CG46 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc5Q8CG46 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc5Q8CG46 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc5Q8CG46 Gm18688-201ENSMUST00000204695 1859 ntBASIC24.26■■□□□ 1.47
Smc5Q8CG46 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Gm5812-201ENSMUST00000061073 957 ntBASIC24.25■■□□□ 1.47
Smc5Q8CG46 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc5Q8CG46 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc5Q8CG46 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Smc5Q8CG46 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smc5Q8CG46 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Gm37352-201ENSMUST00000193908 2181 ntBASIC24.22■■□□□ 1.47
Smc5Q8CG46 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc5Q8CG46 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Gm22238-201ENSMUST00000175222 88 ntBASIC24.21■■□□□ 1.47
Smc5Q8CG46 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC24.21■■□□□ 1.47
Smc5Q8CG46 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc5Q8CG46 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Smc5Q8CG46 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc5Q8CG46 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC24.19■■□□□ 1.46
Smc5Q8CG46 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smc5Q8CG46 BC021767-201ENSMUST00000126387 1716 ntBASIC24.18■■□□□ 1.46
Smc5Q8CG46 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smc5Q8CG46 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms