Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SynpoQ8CC35 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Gm18284-201ENSMUST00000172604 624 ntBASIC18.82■□□□□ 0.6
SynpoQ8CC35 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SynpoQ8CC35 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.82■□□□□ 0.6
SynpoQ8CC35 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SynpoQ8CC35 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SynpoQ8CC35 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SynpoQ8CC35 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynpoQ8CC35 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Gm43173-201ENSMUST00000202246 593 ntBASIC18.79■□□□□ 0.6
SynpoQ8CC35 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.79■□□□□ 0.6
SynpoQ8CC35 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynpoQ8CC35 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SynpoQ8CC35 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.77■□□□□ 0.6
SynpoQ8CC35 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SynpoQ8CC35 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SynpoQ8CC35 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Gm12251-201ENSMUST00000117893 792 ntBASIC18.76■□□□□ 0.59
SynpoQ8CC35 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SynpoQ8CC35 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SynpoQ8CC35 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynpoQ8CC35 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynpoQ8CC35 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SynpoQ8CC35 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms