Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc46a2Q8CA03 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
Slc46a2Q8CA03 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc46a2Q8CA03 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc46a2Q8CA03 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc46a2Q8CA03 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc46a2Q8CA03 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slc46a2Q8CA03 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Gm43530-201ENSMUST00000195920 274 ntBASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc46a2Q8CA03 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc46a2Q8CA03 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc46a2Q8CA03 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc46a2Q8CA03 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc46a2Q8CA03 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc46a2Q8CA03 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc46a2Q8CA03 BC021767-201ENSMUST00000126387 1716 ntBASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc46a2Q8CA03 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Gm15546-201ENSMUST00000122095 826 ntBASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc46a2Q8CA03 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Gm10232-201ENSMUST00000089221 720 ntBASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc46a2Q8CA03 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.68■□□□□ 0.58
Slc46a2Q8CA03 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms