Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Uba3Q8C878 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.62■□□□□ 0.89
Uba3Q8C878 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.62■□□□□ 0.89
Uba3Q8C878 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Uba3Q8C878 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Uba3Q8C878 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.62■□□□□ 0.89
Uba3Q8C878 Smad6-203ENSMUST00000179458 273 ntBASIC20.62■□□□□ 0.89
Uba3Q8C878 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Uba3Q8C878 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.62■□□□□ 0.89
Uba3Q8C878 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Uba3Q8C878 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 AA386476-201ENSMUST00000098781 1665 ntBASIC20.61■□□□□ 0.89
Uba3Q8C878 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Uba3Q8C878 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.61■□□□□ 0.89
Uba3Q8C878 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Uba3Q8C878 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Uba3Q8C878 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Uba3Q8C878 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Serp2-204ENSMUST00000228055 705 ntBASIC20.6■□□□□ 0.89
Uba3Q8C878 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Uba3Q8C878 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Uba3Q8C878 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Uba3Q8C878 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Uba3Q8C878 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uba3Q8C878 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uba3Q8C878 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Uba3Q8C878 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Uba3Q8C878 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uba3Q8C878 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Uba3Q8C878 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Uba3Q8C878 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.57■□□□□ 0.88
Uba3Q8C878 Gm40848-201ENSMUST00000221998 324 ntBASIC20.57■□□□□ 0.88
Uba3Q8C878 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Uba3Q8C878 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Uba3Q8C878 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Uba3Q8C878 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Uba3Q8C878 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Uba3Q8C878 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Uba3Q8C878 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.56■□□□□ 0.88
Uba3Q8C878 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.55■□□□□ 0.88
Uba3Q8C878 Gm26833-201ENSMUST00000180899 440 ntBASIC20.55■□□□□ 0.88
Uba3Q8C878 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Uba3Q8C878 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms