Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.87■□□□□ 0.93
Fam78aQ8C552 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Fam78aQ8C552 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.86■□□□□ 0.93
Fam78aQ8C552 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Fam78aQ8C552 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Fam78aQ8C552 AA386476-201ENSMUST00000098781 1665 ntBASIC20.86■□□□□ 0.93
Fam78aQ8C552 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Fam78aQ8C552 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.85■□□□□ 0.93
Fam78aQ8C552 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam78aQ8C552 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Fam78aQ8C552 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.84■□□□□ 0.93
Fam78aQ8C552 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fam78aQ8C552 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.83■□□□□ 0.93
Fam78aQ8C552 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Mir5133-201ENSMUST00000174955 77 ntBASIC20.83■□□□□ 0.93
Fam78aQ8C552 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.83■□□□□ 0.93
Fam78aQ8C552 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Fam78aQ8C552 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Fam78aQ8C552 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Fam78aQ8C552 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Fam78aQ8C552 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam78aQ8C552 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam78aQ8C552 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fam78aQ8C552 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.81■□□□□ 0.92
Fam78aQ8C552 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam78aQ8C552 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.81■□□□□ 0.92
Fam78aQ8C552 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam78aQ8C552 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Fam78aQ8C552 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fam78aQ8C552 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Fam78aQ8C552 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fam78aQ8C552 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam78aQ8C552 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Gm12441-201ENSMUST00000121806 588 ntBASIC20.77■□□□□ 0.92
Fam78aQ8C552 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.77■□□□□ 0.92
Fam78aQ8C552 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Fam78aQ8C552 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.77■□□□□ 0.91
Fam78aQ8C552 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.77■□□□□ 0.91
Fam78aQ8C552 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms