Protein–RNA interactions for Protein: Q8C3Q5

Shisa7, Protein shisa-7, mousemouse

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa7Q8C3Q5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Gm10033-202ENSMUST00000211874 928 ntBASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.84■□□□□ 0.61
Shisa7Q8C3Q5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa7Q8C3Q5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.83■□□□□ 0.61
Shisa7Q8C3Q5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shisa7Q8C3Q5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Shisa7Q8C3Q5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shisa7Q8C3Q5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shisa7Q8C3Q5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Gm7291-201ENSMUST00000199147 382 ntBASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shisa7Q8C3Q5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Shisa7Q8C3Q5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Gm27405-201ENSMUST00000184201 112 ntBASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shisa7Q8C3Q5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 AV356131-201ENSMUST00000206201 750 ntBASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.78■□□□□ 0.6
Shisa7Q8C3Q5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa7Q8C3Q5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.77■□□□□ 0.59
Shisa7Q8C3Q5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa7Q8C3Q5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shisa7Q8C3Q5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa7Q8C3Q5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms