Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tsen54Q8C2A2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Gm10232-201ENSMUST00000089221 720 ntBASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tsen54Q8C2A2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Gm15820-201ENSMUST00000201566 728 ntBASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tsen54Q8C2A2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.27■□□□□ 0.19
Tsen54Q8C2A2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tsen54Q8C2A2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Tsen54Q8C2A2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tsen54Q8C2A2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Tsen54Q8C2A2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tsen54Q8C2A2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms