Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ska3Q8C263 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ska3Q8C263 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ska3Q8C263 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Gm43173-201ENSMUST00000202246 593 ntBASIC18.36■□□□□ 0.53
Ska3Q8C263 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.36■□□□□ 0.53
Ska3Q8C263 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ska3Q8C263 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ska3Q8C263 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.35■□□□□ 0.53
Ska3Q8C263 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ska3Q8C263 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Ska3Q8C263 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.35■□□□□ 0.53
Ska3Q8C263 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.35■□□□□ 0.53
Ska3Q8C263 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.35■□□□□ 0.53
Ska3Q8C263 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ska3Q8C263 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ska3Q8C263 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ska3Q8C263 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ska3Q8C263 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.33■□□□□ 0.53
Ska3Q8C263 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ska3Q8C263 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Ska3Q8C263 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ska3Q8C263 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ska3Q8C263 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ska3Q8C263 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
Ska3Q8C263 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.32■□□□□ 0.52
Ska3Q8C263 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ska3Q8C263 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
Ska3Q8C263 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ska3Q8C263 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ska3Q8C263 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ska3Q8C263 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ska3Q8C263 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ska3Q8C263 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ska3Q8C263 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ska3Q8C263 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ska3Q8C263 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ska3Q8C263 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.3■□□□□ 0.52
Ska3Q8C263 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ska3Q8C263 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ska3Q8C263 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
Ska3Q8C263 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.3■□□□□ 0.52
Ska3Q8C263 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ska3Q8C263 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ska3Q8C263 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ska3Q8C263 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ska3Q8C263 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ska3Q8C263 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ska3Q8C263 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ska3Q8C263 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.29■□□□□ 0.52
Ska3Q8C263 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ska3Q8C263 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ska3Q8C263 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ska3Q8C263 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms