Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.22■□□□□ 0.51
Vps9d1Q8C190 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps9d1Q8C190 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vps9d1Q8C190 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.21■□□□□ 0.5
Vps9d1Q8C190 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vps9d1Q8C190 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Mir6236-201ENSMUST00000184437 123 ntBASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps9d1Q8C190 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps9d1Q8C190 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps9d1Q8C190 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps9d1Q8C190 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps9d1Q8C190 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms