Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp43Q8BUM9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp43Q8BUM9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Usp43Q8BUM9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.83■□□□□ 0.77
Usp43Q8BUM9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp43Q8BUM9 Serp2-204ENSMUST00000228055 705 ntBASIC19.83■□□□□ 0.77
Usp43Q8BUM9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp43Q8BUM9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Usp43Q8BUM9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp43Q8BUM9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp43Q8BUM9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp43Q8BUM9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp43Q8BUM9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp43Q8BUM9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Usp43Q8BUM9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp43Q8BUM9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp43Q8BUM9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp43Q8BUM9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Usp43Q8BUM9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp43Q8BUM9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp43Q8BUM9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms