Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne3Q8BT60 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne3Q8BT60 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cpne3Q8BT60 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne3Q8BT60 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne3Q8BT60 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne3Q8BT60 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.81■□□□□ 0.6
Cpne3Q8BT60 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.81■□□□□ 0.6
Cpne3Q8BT60 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne3Q8BT60 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne3Q8BT60 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Cpne3Q8BT60 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Gm45102-201ENSMUST00000207427 857 ntBASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cpne3Q8BT60 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpne3Q8BT60 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpne3Q8BT60 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne3Q8BT60 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cpne3Q8BT60 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cpne3Q8BT60 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne3Q8BT60 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne3Q8BT60 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms