Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scfd1Q8BRF7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scfd1Q8BRF7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scfd1Q8BRF7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.43■■□□□ 1.18
Scfd1Q8BRF7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Gm7514-201ENSMUST00000209475 934 ntBASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Scfd1Q8BRF7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scfd1Q8BRF7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scfd1Q8BRF7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scfd1Q8BRF7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Scfd1Q8BRF7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scfd1Q8BRF7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scfd1Q8BRF7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scfd1Q8BRF7 Gm13146-201ENSMUST00000118508 780 ntBASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scfd1Q8BRF7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scfd1Q8BRF7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.37■■□□□ 1.17
Scfd1Q8BRF7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms