Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smco3Q8BQM7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smco3Q8BQM7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Gm7332-201ENSMUST00000118351 454 ntBASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
Smco3Q8BQM7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smco3Q8BQM7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smco3Q8BQM7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smco3Q8BQM7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smco3Q8BQM7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smco3Q8BQM7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Smco3Q8BQM7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smco3Q8BQM7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smco3Q8BQM7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms