Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.41■□□□□ 0.54
Ckap4Q8BMK4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ckap4Q8BMK4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.39■□□□□ 0.54
Ckap4Q8BMK4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Ckap4Q8BMK4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.39■□□□□ 0.53
Ckap4Q8BMK4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ckap4Q8BMK4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Ckap4Q8BMK4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ckap4Q8BMK4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ckap4Q8BMK4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ckap4Q8BMK4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ckap4Q8BMK4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ckap4Q8BMK4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms