Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Gm7332-201ENSMUST00000118351 454 ntBASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc5a7Q8BGY9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc5a7Q8BGY9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc5a7Q8BGY9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc5a7Q8BGY9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc5a7Q8BGY9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc5a7Q8BGY9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc5a7Q8BGY9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc5a7Q8BGY9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc5a7Q8BGY9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc5a7Q8BGY9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc5a7Q8BGY9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc5a7Q8BGY9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc5a7Q8BGY9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms