Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim6Q8BGE7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim6Q8BGE7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.65■□□□□ 0.9
Trim6Q8BGE7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim6Q8BGE7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim6Q8BGE7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Mir6236-201ENSMUST00000184437 123 ntBASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim6Q8BGE7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim6Q8BGE7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim6Q8BGE7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim6Q8BGE7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim6Q8BGE7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim6Q8BGE7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.58■□□□□ 0.89
Trim6Q8BGE7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms