Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ubp1Q811S7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubp1Q811S7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubp1Q811S7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.21■□□□□ 0.67
Ubp1Q811S7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubp1Q811S7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Ubp1Q811S7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ubp1Q811S7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubp1Q811S7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.2■□□□□ 0.66
Ubp1Q811S7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubp1Q811S7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubp1Q811S7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
Ubp1Q811S7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubp1Q811S7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Serp2-204ENSMUST00000228055 705 ntBASIC19.17■□□□□ 0.66
Ubp1Q811S7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubp1Q811S7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Smad6-203ENSMUST00000179458 273 ntBASIC19.16■□□□□ 0.66
Ubp1Q811S7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.16■□□□□ 0.66
Ubp1Q811S7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ubp1Q811S7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms