Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nucks1Q80XU3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nucks1Q80XU3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nucks1Q80XU3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.83■□□□□ 0.93
Nucks1Q80XU3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nucks1Q80XU3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nucks1Q80XU3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nucks1Q80XU3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Nucks1Q80XU3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nucks1Q80XU3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nucks1Q80XU3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nucks1Q80XU3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nucks1Q80XU3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nucks1Q80XU3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.81■□□□□ 0.92
Nucks1Q80XU3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nucks1Q80XU3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nucks1Q80XU3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.79■□□□□ 0.92
Nucks1Q80XU3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nucks1Q80XU3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nucks1Q80XU3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Nucks1Q80XU3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nucks1Q80XU3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nucks1Q80XU3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nucks1Q80XU3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nucks1Q80XU3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms