Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Otop1Q80VM9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Otop1Q80VM9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.75■□□□□ 0.59
Otop1Q80VM9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.75■□□□□ 0.59
Otop1Q80VM9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Otop1Q80VM9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.75■□□□□ 0.59
Otop1Q80VM9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otop1Q80VM9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.74■□□□□ 0.59
Otop1Q80VM9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otop1Q80VM9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.73■□□□□ 0.59
Otop1Q80VM9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.73■□□□□ 0.59
Otop1Q80VM9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Otop1Q80VM9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.72■□□□□ 0.59
Otop1Q80VM9 Gm20760-201ENSMUST00000179197 648 ntBASIC18.72■□□□□ 0.59
Otop1Q80VM9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Otop1Q80VM9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.71■□□□□ 0.59
Otop1Q80VM9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Otop1Q80VM9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Otop1Q80VM9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.7■□□□□ 0.58
Otop1Q80VM9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.7■□□□□ 0.58
Otop1Q80VM9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Otop1Q80VM9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.69■□□□□ 0.58
Otop1Q80VM9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Otop1Q80VM9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Otop1Q80VM9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Otop1Q80VM9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.68■□□□□ 0.58
Otop1Q80VM9 Gm10252-201ENSMUST00000209541 832 ntBASIC18.68■□□□□ 0.58
Otop1Q80VM9 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.68■□□□□ 0.58
Otop1Q80VM9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Otop1Q80VM9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Otop1Q80VM9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Otop1Q80VM9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms