Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prdm4Q80V63 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prdm4Q80V63 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prdm4Q80V63 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.21■□□□□ 0.83
Prdm4Q80V63 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm4Q80V63 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.21■□□□□ 0.83
Prdm4Q80V63 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Prdm4Q80V63 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.2■□□□□ 0.82
Prdm4Q80V63 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm4Q80V63 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
Prdm4Q80V63 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.19■□□□□ 0.82
Prdm4Q80V63 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Gm10232-201ENSMUST00000089221 720 ntBASIC20.19■□□□□ 0.82
Prdm4Q80V63 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm4Q80V63 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.18■□□□□ 0.82
Prdm4Q80V63 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm4Q80V63 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Prdm4Q80V63 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm4Q80V63 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Prdm4Q80V63 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm4Q80V63 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm4Q80V63 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
Prdm4Q80V63 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Gm15820-201ENSMUST00000201566 728 ntBASIC20.16■□□□□ 0.82
Prdm4Q80V63 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.16■□□□□ 0.82
Prdm4Q80V63 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm4Q80V63 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Gm10399-202ENSMUST00000202768 748 ntBASIC20.15■□□□□ 0.82
Prdm4Q80V63 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm4Q80V63 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prdm4Q80V63 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms