Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.43■■□□□ 1.02
Ush1gQ80T11 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ush1gQ80T11 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ush1gQ80T11 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ush1gQ80T11 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Ush1gQ80T11 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.42■■□□□ 1.02
Ush1gQ80T11 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ush1gQ80T11 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.42■■□□□ 1.02
Ush1gQ80T11 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ush1gQ80T11 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ush1gQ80T11 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.41■■□□□ 1.02
Ush1gQ80T11 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.4■■□□□ 1.02
Ush1gQ80T11 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ush1gQ80T11 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ush1gQ80T11 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ush1gQ80T11 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ush1gQ80T11 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ush1gQ80T11 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ush1gQ80T11 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ush1gQ80T11 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.38■■□□□ 1.01
Ush1gQ80T11 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ush1gQ80T11 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ush1gQ80T11 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Gm13234-201ENSMUST00000120010 747 ntBASIC21.36■■□□□ 1.01
Ush1gQ80T11 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.36■■□□□ 1.01
Ush1gQ80T11 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ush1gQ80T11 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.35■■□□□ 1.01
Ush1gQ80T11 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.34■■□□□ 1.01
Ush1gQ80T11 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms