Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Gm12366-201ENSMUST00000121722 873 ntBASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Gm5786-201ENSMUST00000085368 882 ntBASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TwistnbQ78WZ7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TwistnbQ78WZ7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.86■□□□□ 0.77
TwistnbQ78WZ7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TwistnbQ78WZ7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TwistnbQ78WZ7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TwistnbQ78WZ7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TwistnbQ78WZ7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TwistnbQ78WZ7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TwistnbQ78WZ7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.83■□□□□ 0.76
TwistnbQ78WZ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TwistnbQ78WZ7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TwistnbQ78WZ7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms