Protein–RNA interactions for Protein: Q6ZPY7

Kdm3b, Lysine-specific demethylase 3B, mousemouse

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3bQ6ZPY7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3bQ6ZPY7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3bQ6ZPY7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3bQ6ZPY7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3bQ6ZPY7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3bQ6ZPY7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 AA386476-201ENSMUST00000098781 1665 ntBASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Kdm3bQ6ZPY7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Kdm3bQ6ZPY7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Gm22325-201ENSMUST00000158904 308 ntBASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Kdm3bQ6ZPY7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Kdm3bQ6ZPY7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Kdm3bQ6ZPY7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Kdm3bQ6ZPY7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC28.78■■■□□ 2.2
Kdm3bQ6ZPY7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC28.78■■■□□ 2.2
Kdm3bQ6ZPY7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Gm4968-201ENSMUST00000071458 858 ntBASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Kdm3bQ6ZPY7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Kdm3bQ6ZPY7 Gm13148-201ENSMUST00000118892 745 ntBASIC28.75■■■□□ 2.19
Kdm3bQ6ZPY7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC28.75■■■□□ 2.19
Kdm3bQ6ZPY7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Kdm3bQ6ZPY7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Kdm3bQ6ZPY7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Kdm3bQ6ZPY7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC28.74■■■□□ 2.19
Kdm3bQ6ZPY7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC28.74■■■□□ 2.19
Kdm3bQ6ZPY7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Kdm3bQ6ZPY7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
Kdm3bQ6ZPY7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Gm12527-201ENSMUST00000117967 564 ntBASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Gm13534-201ENSMUST00000121169 513 ntBASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Mir7071-201ENSMUST00000184847 69 ntBASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm3bQ6ZPY7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Kdm3bQ6ZPY7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Kdm3bQ6ZPY7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC28.72■■■□□ 2.19
Kdm3bQ6ZPY7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC28.71■■■□□ 2.19
Kdm3bQ6ZPY7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm3bQ6ZPY7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm3bQ6ZPY7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm3bQ6ZPY7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm3bQ6ZPY7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC28.7■■■□□ 2.19
Kdm3bQ6ZPY7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm3bQ6ZPY7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 Gm10655-201ENSMUST00000098658 1397 ntBASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Kdm3bQ6ZPY7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC28.68■■■□□ 2.18
Kdm3bQ6ZPY7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3bQ6ZPY7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.67■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms