Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssx9Q6XAS3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ssx9Q6XAS3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ssx9Q6XAS3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.46■□□□□ 0.71
Ssx9Q6XAS3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ssx9Q6XAS3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ssx9Q6XAS3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssx9Q6XAS3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ssx9Q6XAS3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssx9Q6XAS3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssx9Q6XAS3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssx9Q6XAS3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssx9Q6XAS3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssx9Q6XAS3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.37■□□□□ 0.69
Ssx9Q6XAS3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Ssx9Q6XAS3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssx9Q6XAS3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.37■□□□□ 0.69
Ssx9Q6XAS3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Ssx9Q6XAS3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssx9Q6XAS3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssx9Q6XAS3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssx9Q6XAS3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssx9Q6XAS3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms