Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rif1Q6PR54 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.58■□□□□ 0.25
Rif1Q6PR54 Gm13534-201ENSMUST00000121169 513 ntBASIC16.58■□□□□ 0.25
Rif1Q6PR54 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rif1Q6PR54 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rif1Q6PR54 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.58■□□□□ 0.24
Rif1Q6PR54 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rif1Q6PR54 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rif1Q6PR54 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Gm17971-201ENSMUST00000190239 806 ntBASIC16.57■□□□□ 0.24
Rif1Q6PR54 Gm2559-201ENSMUST00000201323 363 ntBASIC16.57■□□□□ 0.24
Rif1Q6PR54 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rif1Q6PR54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Rab3c-203ENSMUST00000224180 967 ntBASIC16.56■□□□□ 0.24
Rif1Q6PR54 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.56■□□□□ 0.24
Rif1Q6PR54 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rif1Q6PR54 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Rif1Q6PR54 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rif1Q6PR54 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.54■□□□□ 0.24
Rif1Q6PR54 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.54■□□□□ 0.24
Rif1Q6PR54 Gm10698-201ENSMUST00000182663 604 ntBASIC16.54■□□□□ 0.24
Rif1Q6PR54 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rif1Q6PR54 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rif1Q6PR54 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rif1Q6PR54 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rif1Q6PR54 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Rif1Q6PR54 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.52■□□□□ 0.24
Rif1Q6PR54 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rif1Q6PR54 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rif1Q6PR54 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rif1Q6PR54 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rif1Q6PR54 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.52■□□□□ 0.23
Rif1Q6PR54 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Gm23634-201ENSMUST00000175071 91 ntBASIC16.51■□□□□ 0.23
Rif1Q6PR54 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rif1Q6PR54 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms