Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scaf4Q6PFF0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scaf4Q6PFF0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scaf4Q6PFF0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.24■□□□□ 0.67
Scaf4Q6PFF0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Scaf4Q6PFF0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Gm9870-201ENSMUST00000063874 645 ntBASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
Scaf4Q6PFF0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf4Q6PFF0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf4Q6PFF0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf4Q6PFF0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scaf4Q6PFF0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.19■□□□□ 0.66
Scaf4Q6PFF0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.19■□□□□ 0.66
Scaf4Q6PFF0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.19■□□□□ 0.66
Scaf4Q6PFF0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms