Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a1Q6PEM8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Slc46a1Q6PEM8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.17■□□□□ 0.34
Slc46a1Q6PEM8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc46a1Q6PEM8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Gm7291-201ENSMUST00000199147 382 ntBASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a1Q6PEM8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Gm18671-201ENSMUST00000214826 683 ntBASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a1Q6PEM8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc46a1Q6PEM8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Gm42778-201ENSMUST00000199644 553 ntBASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc46a1Q6PEM8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc46a1Q6PEM8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc46a1Q6PEM8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc46a1Q6PEM8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms