Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdgfrlQ6PE55 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PdgfrlQ6PE55 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.23■□□□□ 0.83
PdgfrlQ6PE55 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PdgfrlQ6PE55 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Gm38205-201ENSMUST00000192243 258 ntBASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
PdgfrlQ6PE55 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PdgfrlQ6PE55 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PdgfrlQ6PE55 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdgfrlQ6PE55 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PdgfrlQ6PE55 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PdgfrlQ6PE55 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PdgfrlQ6PE55 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrlQ6PE55 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms