Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.83■□□□□ 0.76
Sp140Q6NSQ5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sp140Q6NSQ5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sp140Q6NSQ5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.81■□□□□ 0.76
Sp140Q6NSQ5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sp140Q6NSQ5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sp140Q6NSQ5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Gm21956-201ENSMUST00000179946 522 ntBASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sp140Q6NSQ5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sp140Q6NSQ5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.77■□□□□ 0.75
Sp140Q6NSQ5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sp140Q6NSQ5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sp140Q6NSQ5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.74■□□□□ 0.75
Sp140Q6NSQ5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms