Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cep290Q6A078 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cep290Q6A078 Gm27741-201ENSMUST00000185060 237 ntBASIC20.22■□□□□ 0.83
Cep290Q6A078 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.22■□□□□ 0.83
Cep290Q6A078 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.22■□□□□ 0.83
Cep290Q6A078 Rab3c-203ENSMUST00000224180 967 ntBASIC20.22■□□□□ 0.83
Cep290Q6A078 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cep290Q6A078 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cep290Q6A078 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Gm11249-201ENSMUST00000117071 859 ntBASIC20.21■□□□□ 0.83
Cep290Q6A078 Gm6433-201ENSMUST00000118634 875 ntBASIC20.21■□□□□ 0.83
Cep290Q6A078 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.21■□□□□ 0.83
Cep290Q6A078 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cep290Q6A078 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cep290Q6A078 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.2■□□□□ 0.83
Cep290Q6A078 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cep290Q6A078 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.2■□□□□ 0.82
Cep290Q6A078 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cep290Q6A078 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cep290Q6A078 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cep290Q6A078 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cep290Q6A078 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cep290Q6A078 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cep290Q6A078 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.19■□□□□ 0.82
Cep290Q6A078 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Cep290Q6A078 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.19■□□□□ 0.82
Cep290Q6A078 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cep290Q6A078 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cep290Q6A078 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.18■□□□□ 0.82
Cep290Q6A078 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cep290Q6A078 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cep290Q6A078 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cep290Q6A078 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cep290Q6A078 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cep290Q6A078 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cep290Q6A078 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cep290Q6A078 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cep290Q6A078 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cep290Q6A078 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.17■□□□□ 0.82
Cep290Q6A078 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.17■□□□□ 0.82
Cep290Q6A078 Gm12896-201ENSMUST00000118430 226 ntBASIC20.17■□□□□ 0.82
Cep290Q6A078 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cep290Q6A078 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.16■□□□□ 0.82
Cep290Q6A078 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Cep290Q6A078 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.16■□□□□ 0.82
Cep290Q6A078 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cep290Q6A078 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
Cep290Q6A078 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cep290Q6A078 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cep290Q6A078 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cep290Q6A078 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
Cep290Q6A078 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cep290Q6A078 Gm10231-201ENSMUST00000181584 441 ntBASIC20.14■□□□□ 0.82
Cep290Q6A078 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cep290Q6A078 Gm2559-201ENSMUST00000201323 363 ntBASIC20.14■□□□□ 0.82
Cep290Q6A078 Gm10175-202ENSMUST00000208752 441 ntBASIC20.14■□□□□ 0.82
Cep290Q6A078 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.14■□□□□ 0.82
Cep290Q6A078 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cep290Q6A078 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cep290Q6A078 Mir1199-201ENSMUST00000117015 119 ntBASIC20.14■□□□□ 0.81
Cep290Q6A078 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms