Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdc3Q64519 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.72■□□□□ 0.59
Sdc3Q64519 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc3Q64519 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Sdc3Q64519 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Sdc3Q64519 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc3Q64519 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sdc3Q64519 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sdc3Q64519 Gm18284-201ENSMUST00000172604 624 ntBASIC18.7■□□□□ 0.58
Sdc3Q64519 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.7■□□□□ 0.58
Sdc3Q64519 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.7■□□□□ 0.58
Sdc3Q64519 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sdc3Q64519 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc3Q64519 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.7■□□□□ 0.58
Sdc3Q64519 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc3Q64519 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc3Q64519 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc3Q64519 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sdc3Q64519 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc3Q64519 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc3Q64519 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sdc3Q64519 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc3Q64519 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc3Q64519 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sdc3Q64519 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc3Q64519 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc3Q64519 Gm11421-201ENSMUST00000122124 294 ntBASIC18.66■□□□□ 0.58
Sdc3Q64519 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc3Q64519 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc3Q64519 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Sdc3Q64519 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc3Q64519 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sdc3Q64519 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc3Q64519 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sdc3Q64519 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Gm8495-201ENSMUST00000188740 694 ntBASIC18.65■□□□□ 0.58
Sdc3Q64519 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Gm5874-201ENSMUST00000096101 508 ntBASIC18.65■□□□□ 0.58
Sdc3Q64519 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc3Q64519 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdc3Q64519 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.64■□□□□ 0.58
Sdc3Q64519 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdc3Q64519 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Sdc3Q64519 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Sdc3Q64519 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.64■□□□□ 0.57
Sdc3Q64519 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc3Q64519 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms