Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.24■□□□□ 0.67
Irf4Q64287 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf4Q64287 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf4Q64287 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf4Q64287 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 AA386476-201ENSMUST00000098781 1665 ntBASIC19.23■□□□□ 0.67
Irf4Q64287 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf4Q64287 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf4Q64287 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Irf4Q64287 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.22■□□□□ 0.67
Irf4Q64287 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.22■□□□□ 0.67
Irf4Q64287 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Gm9988-201ENSMUST00000069786 435 ntBASIC19.22■□□□□ 0.67
Irf4Q64287 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf4Q64287 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Irf4Q64287 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.21■□□□□ 0.67
Irf4Q64287 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.21■□□□□ 0.67
Irf4Q64287 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.21■□□□□ 0.67
Irf4Q64287 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Irf4Q64287 Gm42569-201ENSMUST00000200539 472 ntBASIC19.21■□□□□ 0.67
Irf4Q64287 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf4Q64287 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Irf4Q64287 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Irf4Q64287 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Irf4Q64287 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.2■□□□□ 0.66
Irf4Q64287 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Irf4Q64287 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.2■□□□□ 0.66
Irf4Q64287 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Irf4Q64287 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.19■□□□□ 0.66
Irf4Q64287 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Gm42778-201ENSMUST00000199644 553 ntBASIC19.19■□□□□ 0.66
Irf4Q64287 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf4Q64287 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Gm18671-201ENSMUST00000214826 683 ntBASIC19.18■□□□□ 0.66
Irf4Q64287 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.18■□□□□ 0.66
Irf4Q64287 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf4Q64287 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
Irf4Q64287 Gm10033-202ENSMUST00000211874 928 ntBASIC19.17■□□□□ 0.66
Irf4Q64287 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.17■□□□□ 0.66
Irf4Q64287 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Irf4Q64287 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf4Q64287 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.16■□□□□ 0.66
Irf4Q64287 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Irf4Q64287 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Irf4Q64287 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms