Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SspnQ62147 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SspnQ62147 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
SspnQ62147 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
SspnQ62147 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SspnQ62147 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SspnQ62147 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.29■□□□□ 0.2
SspnQ62147 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SspnQ62147 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Gm45102-201ENSMUST00000207427 857 ntBASIC16.29■□□□□ 0.2
SspnQ62147 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SspnQ62147 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SspnQ62147 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SspnQ62147 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SspnQ62147 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Golph3-202ENSMUST00000226517 2359 ntBASIC16.28■□□□□ 0.2
SspnQ62147 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.28■□□□□ 0.2
SspnQ62147 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.28■□□□□ 0.2
SspnQ62147 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SspnQ62147 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SspnQ62147 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SspnQ62147 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SspnQ62147 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SspnQ62147 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SspnQ62147 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.27■□□□□ 0.2
SspnQ62147 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SspnQ62147 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SspnQ62147 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SspnQ62147 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SspnQ62147 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SspnQ62147 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SspnQ62147 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.26■□□□□ 0.19
SspnQ62147 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.26■□□□□ 0.19
SspnQ62147 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.26■□□□□ 0.19
SspnQ62147 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SspnQ62147 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.25■□□□□ 0.19
SspnQ62147 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SspnQ62147 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SspnQ62147 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.24■□□□□ 0.19
SspnQ62147 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.24■□□□□ 0.19
SspnQ62147 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.24■□□□□ 0.19
SspnQ62147 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SspnQ62147 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SspnQ62147 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SspnQ62147 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms