Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.11■□□□□ 0.65
Rai1Q61818 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rai1Q61818 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.11■□□□□ 0.65
Rai1Q61818 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.11■□□□□ 0.65
Rai1Q61818 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rai1Q61818 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rai1Q61818 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rai1Q61818 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rai1Q61818 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rai1Q61818 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Rai1Q61818 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rai1Q61818 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rai1Q61818 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rai1Q61818 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Rai1Q61818 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rai1Q61818 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rai1Q61818 Gm5408-201ENSMUST00000197998 747 ntBASIC19.09■□□□□ 0.65
Rai1Q61818 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.09■□□□□ 0.65
Rai1Q61818 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.09■□□□□ 0.65
Rai1Q61818 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Rai1Q61818 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rai1Q61818 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.09■□□□□ 0.65
Rai1Q61818 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rai1Q61818 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rai1Q61818 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rai1Q61818 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.09■□□□□ 0.65
Rai1Q61818 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.09■□□□□ 0.65
Rai1Q61818 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rai1Q61818 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rai1Q61818 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rai1Q61818 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
Rai1Q61818 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.08■□□□□ 0.65
Rai1Q61818 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rai1Q61818 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.08■□□□□ 0.65
Rai1Q61818 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rai1Q61818 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rai1Q61818 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rai1Q61818 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rai1Q61818 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rai1Q61818 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rai1Q61818 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rai1Q61818 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rai1Q61818 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.06■□□□□ 0.64
Rai1Q61818 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rai1Q61818 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.06■□□□□ 0.64
Rai1Q61818 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rai1Q61818 Gm13534-201ENSMUST00000121169 513 ntBASIC19.05■□□□□ 0.64
Rai1Q61818 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.05■□□□□ 0.64
Rai1Q61818 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.05■□□□□ 0.64
Rai1Q61818 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.05■□□□□ 0.64
Rai1Q61818 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rai1Q61818 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rai1Q61818 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rai1Q61818 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rai1Q61818 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.05■□□□□ 0.64
Rai1Q61818 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.05■□□□□ 0.64
Rai1Q61818 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rai1Q61818 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rai1Q61818 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rai1Q61818 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rai1Q61818 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rai1Q61818 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rai1Q61818 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.03■□□□□ 0.64
Rai1Q61818 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.03■□□□□ 0.64
Rai1Q61818 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rai1Q61818 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rai1Q61818 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rai1Q61818 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Rai1Q61818 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rai1Q61818 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rai1Q61818 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.02■□□□□ 0.64
Rai1Q61818 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rai1Q61818 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.02■□□□□ 0.64
Rai1Q61818 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.02■□□□□ 0.64
Rai1Q61818 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rai1Q61818 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.02■□□□□ 0.64
Rai1Q61818 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rai1Q61818 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.02■□□□□ 0.63
Rai1Q61818 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.01■□□□□ 0.63
Rai1Q61818 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rai1Q61818 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms